Code

Modeling mRNA and Protein Transport (Link, Python Dash)
Tchumatchenko Lab, Neuronal Network Simulations (Source code on GitLab, C++)
Nold, A., Goddard, B., Kalliadasis, S., 2DChebClass (Source code on Github, Matlab)

Papers

Nold, A., Goddard, B.D., Sibley, D.N, & Kalliadasis, “Insights into the moving contact line from a reductionist continuum-particle model” [in preparation].
L. Bernáez Timón, P. Ekelmans, S. Konrad, A. Nold, T. Tchumatchenko, "Reconciling contrast invariance and non-linear computation in cortical circuits" BioRxiv
Nold, A., Sun, C., Heilemann, M., Tchumatchenko, T., Schuman, E., “Unbiased choice of global clustering parameters in single-molecule localization microscopy” BioRxiv

Becker, S., Nold, A., Tchumatchenko, T., “Formation and synaptic control of active transient working memory representations” BioRxiv
Sun, C., Nold, A., Heilemann, M., Tchumatchenko, T., Schuman, E., “The Spatial Scale of Synaptic Protein Allocation during Homeostatic Plasticity” BioRxiv
Nold, A., Batulin, D., Birkner, K., Bittner, S., Tchumatchenko, T., 2020 ”How repair-or-dispose decisions under stress can initiate disease progression” iScience 23 Art. No. 101701, Links: iScience , BioRxiv
Sartori, F., Hafner, A.-S., Karimi, A., Nold, A., Fonkeu, Y., Schuman, E., 2020, “Statistical laws of protein motion in dendritic trees” Cell Reports 33 Art. No. 108391, Links: Cell Reports , ResearchGate

Braga, C., Smith, E., Nold, A., Sibley, D. N., Kalliadasis, S., 2018, “The pressure tensor across a liquid-vapour interface”, J. Chem. Phys. 149, Art. No. 044705 (9 pgs.) Links: ArXiv, J Chem Phys
Nold, A., MacDowell, L. G., Sibley, D. N., Goddard, B. D., Kalliadasis, S., 2018, “The vicinity of an equilibrium three-phase contact line using density-functional theory: density profiles normal to the fluid interface”, Mol. Phys. (5 pgs.) Links: core.ac.uk, Mol Phys

Morciano, M., Fasano, M., Nold, A., Braga, C., Yatsyshin, P., Sibley, D.N., Goddard, B.D., Chiavazzo, E., Asinari, P., and Kalliadasis, S., 2017 “Nonequilibrium molecular dynamics simulations of nanoconfined fluids at solid-liquid interfaces” J. Chem. Phys. 146 Art. No. 244507 (11 pgs.). PubMed
Nold, A., Goddard, B. D., Yatsyshin, P., Savva, N., & Kalliadasis, S., 2017 ”Pseudospectral methods for density functional theory in bounded and unbounded domains." J. Comp. Phys. 334 639-664. Links: ArXiv, J Comp Phys

Nold, A. 2016 "From the Nano- to the Macroscale – Bridging Scales for the Moving Contact Line Problem", PhD Thesis ResearchGate
Goddard, B. D., Nold, A., & Kalliadasis, S., 2016 “Dynamical density functional theory with hydrodynamic interactions in confined geometries” J. Chem. Phys. 145 Art. No. 214106 (19 pgs.). PubMed

Nold, A., Oberlack, M. & Cheviakov, A. F., 2015 “On new stability modes of plane canonical shear flows using symmetry classification,” J. Math. Phys. 56 Art. No. 113101 (21 pgs.). Links: J Math Phys, math.usask.ca
Nold, A., Sibley, D.N., Goddard, B.D. & Kalliadasis, S., 2015 “Nanoscale fluid structure of liquid-solid-vapour contact lines for a wide range of contact angles,” Math. Model. Nat. Phenom. 10 111–125. Links: ArXiv, MMNP

Sibley, D.N., Nold, A. & Kalliadasis, S. 2014 “The asymptotics of the moving contact line: Cracking an old nut,” J. Fluid Mech. 764 445-462. Links: lboro.ac.uk
Sibley, D.N., Nold, A., Savva, N. & Kalliadasis, S. 2014, “A comparison of slip, disjoining pressure, and interface formation models for contact line motion through asymptotic analysis of thin two-dimensional droplet spreading,” J. Eng. Math 94 19-41. ArXiv
Nold, A., Sibley, D.N., Goddard, B.D. & Kalliadasis, S. 2014, “Fluid structure in the immediate vicinity of an equilibrium three-phase contact line and assessment of disjoining pressure models using density functional theory,” Phys. Fluids 26 Art. No. 072001 (16 pgs) (Featured in the “Research highlights from Physics of Fluids”). Links: Loughborough repository, PoF

Nold, A. & Oberlack, M. 2013 “Symmetry analysis in linear hydrodynamic stability theory: Classical and new modes in linear shear,” Phys. Fluids 25 Art. No. 104101 (18 pgs). ArXiv
Goddard, B.D., Nold, A. & Kalliadasis, S. 2013 “Multi-species dynamical density functional theory,” J. Chem. Phys. 138 Art. No. 144904 (9 pgs). J Chem Phys
Goddard, B.D., Nold, A., Savva, N., Yatsyshin, P. & Kalliadasis, S. 2013 “Unification of dynamic density functional theory for colloidal fluids to include inertia and hydrodynamic interactions: derivation and numerical experiments,” J. Phys.: Condens. 25 Art. No. 035101 (14 pgs). PubMed
Sibley, D.N., Nold, A. & Kalliadasis, S. 2013 “Unifying binary fluid diffuse-interface models in the sharp-interface limit,” J. Fluid Mech. 736 5-43. J Fluid Mech
Sibley, D.N., Nold, A., Savva, N. & Kalliadasis, S. 2013 “On the moving contact line singularity: Asymptotics of a diffuse-interface model,” Eur. Phys. J. E 36 1292-8941. Imperial
Sibley, D.N., Nold, A., Savva, N. & Kalliadasis S. 2013 “The contact line behaviour of solid- liquid-gas diffuse-interface model,” Phys. Fluids 25 Art. No. 092111 (27 pgs) ArXiv

Goddard, B.D., Nold, A., Savva, N., Pavliotis, G.A., Kalliadasis, S. 2012 “General dynamical density functional theory for classical fluids,” Phys. Rev. Lett. 109 Art. No. 120603 (5 pgs). ArXiv

Nold, A., Malijevský, A. & Kalliadasis, S. 2011 “Wetting on a spherical wall: influence of liquid- gas interfacial properties,” Phys. Rev. E 84 Art. No. 021603 (17 pgs). ArXiv
Nold, A., Malijevský, A. & Kalliadasis, S. 2011 “Critical assessment of effective interfacial potentials based on a density functional theory for wetting phenomena on curved substrates,” Eur. Phys. J. Special Topics 197 185-191. ResearchGate

Nold, A., Oberlack, M. & Cheviakov, A.F. 2010 “Applications of symmetry analysis in stability theory,” New Results in Numerical and Experimental Fluid Mechanics VII,’ Notes on Numerical Fluid Mechanics and Multidisciplinary Design 112 257-264. ResearchGate